miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|83280269|gb|DV944277.1|DV944277 AGCAGGCTGGTACCGGTCCGGAATCCCGGGAGCAAGATGGCTGCGGGTGTACTGGGCGGCTTCGGCCAAAAACTGCTTAC
TGCTGCCTTCTGCGGCGGCTCTCGTGGCTTCATAAAGAACGCTGCTGCTGGTTACTATGCCAACCGTGGAGGAGCCACTT
GGGCACCAGATTATGAATGGATCAAGCAGTTTGAGGGTCCAATTCTTCTGCCCCCGGAAGAGCAGGACAATCTTCCACCA
CCTCTTTGGATGCAGAGGAAACCCCCGTTTGAGAAAAAGATTCGCAACGTAACCATCAACTTTGGTCCCCAGCACCCAGC
AGCCCACGGTGTGCTGAGGCTGGTGCTGGAGCTGGATGGTGAGACTGTGATGCGTGCAGATCCCCACATTGGGCTGCTGC
ACCGAGGAACAGAGAAGCTCATTGAATACAAGACATACACGCAGGCTCTTCCATACTTTGACCGTCTTGACTATGTGTCC
ATGATGTGCAATGAACAGGCATATTCGCTGGCTGTGGAGAAACTGCTCGGCCTGGAGGCTCCCATCAGGGCCAAGTACAT
CCGTACCATGTTTGCTGAGGTTACACGCATCTTGAATCACTGCATGTTCTTGGGGGCTCACGCTATGGATGTGGGCGCCC
TCACTCCTTTCCTGTGGCTCTTTGAGGAACGTGAGAAGATGATGGAGTTCTATGAGAGAGCTTCTGGTGCTCGCCTTCAT
GCAGCCTACGTTCGTC




Most similar to sp|Q0MQG3|NDUS2_PONPY

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q0MQG3|NDUS2_PONPY NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2, mitochondrial OS=Pongo pygmaeus GN=NDUFS2
           PE=2 SV=1
          Length = 463

 Score =  288 bits (736), Expect = 3e-77
 Identities = 131/192 (68%), Positives = 156/192 (81%)
 Frame = +1

Query: 160 WAPDYEWIKQFEGPILLPPEEQDNLPPPLWMQRKPPFEKKIRNVTINFGPQHPAAHGVLR 339
           W PD EW +QF G ++ P +E  +  PP W   +PP +  ++N+T+NFGPQHPAAHGVLR
Sbjct: 37  WQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVEPPKDTIVKNMTLNFGPQHPAAHGVLR 96

Query: 340 LVLELDGETVMRADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQAYSLAVE 519
           LV+EL GE V + DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQAYSLAVE
Sbjct: 97  LVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVE 156

Query: 520 KLLGLEAPIRAKYIRTMFAEVTRILNHCMFLGAHAMDVGALTPFLWLFEEREKMMEFYER 699
           KLL +  P RA++IR +F E+TR+LNH M +  HA+D+GA+TPF WLFEEREKM EFYER
Sbjct: 157 KLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYER 216

Query: 700 ASGARLHAAYVR 735
            SGAR+HAAY+R
Sbjct: 217 VSGARMHAAYIR 228